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VistaPDB

3-Dimensional Macromolecular Structure Viewer.

GeneCoder

Software for the Molecular Biologists. For more information, visit the GeneCoder release page.

JMolar

JMolar molecular calculator for research scientists.

Human Proteome Sequence Motif Matcher

This bioinformatic tool searches the Expasy human proteome database for a user specified peptide sequence.

To use this tool, input a sequence - either specific or redundant - you wish to search the human proteome with. A search will be performed of the Expasy human proteome using this sequence and idetified hits displayed in the next window.

Pattern To Match*
 

 

*A minimum of three non-variable amino acids are necessary to utilize this tool.

 

Abbreviations

  • X: any
  • O: Hydrophobic (L, I, P, F, W, Y, C)
  • B: Hydrophillic (R, N, D, E, Q, H, K, S, T)
  • [OP]: Positive Charge (K, R, H)
  • [ON]: Negative Charge (E, D)

Note that any regular expression pattern can be used as a pattern to match. Not familiar with regular expressions? Go to Regular-Expression.info for more information.


© 2008-2010 Greg Cope