releases

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VistaPDB

3-Dimensional Macromolecular Structure Viewer.

GeneCoder

Software for the Molecular Biologists. For more information, visit the GeneCoder release page.

JMolar

JMolar molecular calculator for research scientists.

software Projects

DNA and Protein Sequence Pattern Finder

This tool will search the input sequence for a given user provided pattern.

Pattern
Sequence
 
Nucleotide Protein

 

Abbreviations

Nucleotides

  • N: A, G, C, T
  • R: A, G
  • Y: C, T
  • W: A, T
  • S: G, C
  • M: A, C
  • K: G, T
  • B: G, C, T
  • H: A, C, T
  • D: A, G, T
  • V: A, G, C

Proteins

  • X: any
  • O: Hydrophobic (L, I, P, F, W, Y, C)
  • B: Hydrophillic (R, N, D, E, Q, H, K, S, T)
  • [OP]: Positive Charge (K, R, H)
  • [ON]: Negative Charge (E, D)
  • X: Unknown

© 2008-2010 Greg Cope